J3_4KZX_004
3D structure
- PDB id
- 4KZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with eIF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.81 Å
Loop
- Sequence
- CCAG*CCAGUAA*UGAUUAAG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4KZX_004 not in the Motif Atlas
- Homologous match to J3_4V88_035
- Geometric discrepancy: 0.2032
- The information below is about J3_4V88_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_25303.1
- Basepair signature
- cWW-tSH-tHW-cSH-cSS-tHH-cSS-tWW-F-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4KZX|1|i|C|1214
4KZX|1|i|C|1215
4KZX|1|i|A|1216
4KZX|1|i|G|1217
*
4KZX|1|i|C|1640
4KZX|1|i|C|1641
4KZX|1|i|A|1642
4KZX|1|i|G|1643
4KZX|1|i|U|1644
4KZX|1|i|A|1645
4KZX|1|i|A|1646
*
4KZX|1|i|U|1668
4KZX|1|i|G|1669
4KZX|1|i|A|1670
4KZX|1|i|U|1671
4KZX|1|i|U|1672
4KZX|1|i|A|1673
4KZX|1|i|A|1674
4KZX|1|i|G|1675
Current chains
- Chain i
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S5
- Chain Q
- 40S ribosomal protein S16
- Chain R
- 40S ribosomal protein S17
- Chain c
- 40S ribosomal protein S28
Coloring options: