J3_4KZY_001
3D structure
- PDB id
- 4KZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.01 Å
Loop
- Sequence
- UGG*UAAGAG*CAUUA
- Length
- 14 nucleotides
- Bulged bases
- 4KZY|1|i|G|917
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4KZY_001 not in the Motif Atlas
- Homologous match to J3_8C3A_034
- Geometric discrepancy: 0.1811
- The information below is about J3_8C3A_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.2
- Basepair signature
- cWW-tSH-cWW-tHW-cWW-cWW-F
- Number of instances in this motif group
- 7
Unit IDs
4KZY|1|i|U|672
4KZY|1|i|G|673
4KZY|1|i|G|674
*
4KZY|1|i|U|914
4KZY|1|i|A|915
4KZY|1|i|A|916
4KZY|1|i|G|917
4KZY|1|i|A|918
4KZY|1|i|G|919
*
4KZY|1|i|C|1015
4KZY|1|i|A|1016
4KZY|1|i|U|1017
4KZY|1|i|U|1018
4KZY|1|i|A|1019
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain H
- 40S Ribosomal Protein S7
- Chain L
- 40S Ribosomal Protein S11
- Chain N
- 40S Ribosomal Protein S13
- Chain W
- 40S Ribosomal Protein S15A
- Chain X
- 40S Ribosomal Protein S23
- Chain b
- 40S Ribosomal Protein S27
Coloring options: