J3_8C3A_034
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGA*UAAUAG*CAUUA
- Length
- 14 nucleotides
- Bulged bases
- 8C3A|1|CM|U|849
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.2
- Basepair signature
- cWW-tSH-cWW-tHW-cWW-cWW-F
- Number of instances in this motif group
- 7
Unit IDs
8C3A|1|CM|U|631
8C3A|1|CM|G|632
8C3A|1|CM|A|633
*
8C3A|1|CM|U|846
8C3A|1|CM|A|847
8C3A|1|CM|A|848
8C3A|1|CM|U|849
8C3A|1|CM|A|850
8C3A|1|CM|G|851
*
8C3A|1|CM|C|947
8C3A|1|CM|A|948
8C3A|1|CM|U|949
8C3A|1|CM|U|950
8C3A|1|CM|A|951
Current chains
- Chain CM
- 18S
Nearby chains
- Chain CU
- 40S ribosomal protein S7
- Chain CY
- 40S ribosomal protein S11A
- Chain DA
- 40S ribosomal protein S13
- Chain DJ
- 40S ribosomal protein S22-A
- Chain DK
- Ribosomal protein S23 (S12)
- Chain DO
- 40S ribosomal protein S27
Coloring options: