J3_4LEL_031

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CUAG*CGAAG*CGUUAAG

Length

16 nucleotides

Bulged bases

4LEL|1|XA|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4LEL_031 not in the Motif Atlas

Homologous match to J3_4LFB_001

Geometric discrepancy: 0.1884

The information below is about J3_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

4LEL|1|XA|C|826
4LEL|1|XA|U|827
4LEL|1|XA|A|828
4LEL|1|XA|G|829
*
4LEL|1|XA|C|857
4LEL|1|XA|G|858
4LEL|1|XA|A|859
4LEL|1|XA|A|860
4LEL|1|XA|G|861
*
4LEL|1|XA|C|868
4LEL|1|XA|G|869
4LEL|1|XA|U|870
4LEL|1|XA|U|871
4LEL|1|XA|A|872
4LEL|1|XA|A|873
4LEL|1|XA|G|874

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XB

30S ribosomal protein S2

Chain XH

30S ribosomal protein S8