J3_4TUA_058

3D structure

PDB id

4TUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

4TUA|1|QA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4TUA_058 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1771

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

4TUA|1|QA|C|990
4TUA|1|QA|U|991
4TUA|1|QA|U|992
4TUA|1|QA|G|993
4TUA|1|QA|A|994
4TUA|1|QA|C|995
4TUA|1|QA|A|996
4TUA|1|QA|U|997
*
4TUA|1|QA|A|1044
4TUA|1|QA|C|1045
4TUA|1|QA|A|1046
4TUA|1|QA|G|1047
*
4TUA|1|QA|C|1210
4TUA|1|QA|U|1211
4TUA|1|QA|U|1212
4TUA|1|QA|A|1213
4TUA|1|QA|C|1214
4TUA|1|QA|G|1215

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QN

30S ribosomal protein S14 type Z

Chain YA

Large subunit ribosomal RNA; LSU rRNA