J3_4TUB_014
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GC*GUGAAAAG*CC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4TUB_014 not in the Motif Atlas
- Homologous match to J3_7RQB_001
- Geometric discrepancy: 0.0666
- The information below is about J3_7RQB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_65070.3
- Basepair signature
- cWW-tWH-cWW-tSH-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
4TUB|1|RA|G|30
4TUB|1|RA|C|31
*
4TUB|1|RA|G|500
4TUB|1|RA|U|501
4TUB|1|RA|G|502
4TUB|1|RA|A|503
4TUB|1|RA|A|504
4TUB|1|RA|A|505
4TUB|1|RA|A|506
4TUB|1|RA|G|507
*
4TUB|1|RA|C|534
4TUB|1|RA|C|535
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RU
- 50S ribosomal protein L20
- Chain RW
- 50S ribosomal protein L22
- Chain RY
- 50S ribosomal protein L24
Coloring options: