J3_4TUB_017
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAGCUA*UAG*CGAG
- Length
- 14 nucleotides
- Bulged bases
- 4TUB|1|RA|G|733, 4TUB|1|RA|G|839
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4TUB_017 not in the Motif Atlas
- Homologous match to J3_7RQB_004
- Geometric discrepancy: 0.1193
- The information below is about J3_7RQB_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_39238.4
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
4TUB|1|RA|C|730
4TUB|1|RA|G|731
4TUB|1|RA|A|732
4TUB|1|RA|G|733
4TUB|1|RA|C|734
4TUB|1|RA|U|735
4TUB|1|RA|A|736
*
4TUB|1|RA|U|820
4TUB|1|RA|A|821
4TUB|1|RA|G|822
*
4TUB|1|RA|C|838
4TUB|1|RA|G|839
4TUB|1|RA|A|840
4TUB|1|RA|G|841
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R7
- 50S ribosomal protein L34
- Chain RD
- 50S ribosomal protein L2
Coloring options: