3D structure

PDB id
4TUB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CGUAAG*CGG*UCAG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4TUB_020 not in the Motif Atlas
Homologous match to J3_7RQB_007
Geometric discrepancy: 0.0761
The information below is about J3_7RQB_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_32852.3
Basepair signature
cWW-tSH-tHW-F-F-cWW-cWW-F
Number of instances in this motif group
4

Unit IDs

4TUB|1|RA|C|1344
4TUB|1|RA|G|1345
4TUB|1|RA|U|1346
4TUB|1|RA|A|1347
4TUB|1|RA|A|1348
4TUB|1|RA|G|1349
*
4TUB|1|RA|C|1671
4TUB|1|RA|G|1672
4TUB|1|RA|G|1673
*
4TUB|1|RA|U|1686
4TUB|1|RA|C|1687
4TUB|1|RA|A|1688
4TUB|1|RA|G|1689

Current chains

Chain RA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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