J3_4TUB_020

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGUAAG*CGG*UCAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4TUB_020 not in the Motif Atlas

Homologous match to J3_7RQB_007

Geometric discrepancy: 0.0761

The information below is about J3_7RQB_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.3

Basepair signature

cWW-tSH-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

4TUB|1|RA|C|1344
4TUB|1|RA|G|1345
4TUB|1|RA|U|1346
4TUB|1|RA|A|1347
4TUB|1|RA|A|1348
4TUB|1|RA|G|1349
*
4TUB|1|RA|C|1671
4TUB|1|RA|G|1672
4TUB|1|RA|G|1673
*
4TUB|1|RA|U|1686
4TUB|1|RA|C|1687
4TUB|1|RA|A|1688
4TUB|1|RA|G|1689

Current chains

Chain RA

23S rRNA

Nearby chains