J3_4TUB_062
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GGGACG*CC*GAAAAGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4TUB_062 not in the Motif Atlas
- Homologous match to J3_9DFE_013
- Geometric discrepancy: 0.0791
- The information below is about J3_9DFE_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34864.2
- Basepair signature
- cWW-F-cWW-F-tHH-F-tHS-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
4TUB|1|RA|G|1470
4TUB|1|RA|G|1471
4TUB|1|RA|G|1472
4TUB|1|RA|A|1473
4TUB|1|RA|C|1474
4TUB|1|RA|G|1475
*
4TUB|1|RA|C|1611
4TUB|1|RA|C|1612
*
4TUB|1|RA|G|1615
4TUB|1|RA|A|1616
4TUB|1|RA|A|1617
4TUB|1|RA|A|1618
4TUB|1|RA|A|1619
4TUB|1|RA|G|1620
4TUB|1|RA|C|1621
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RD
- 50S ribosomal protein L2
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