J3_4TUC_067

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

4TUC|1|XA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4TUC_067 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1518

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

4TUC|1|XA|C|990
4TUC|1|XA|U|991
4TUC|1|XA|U|992
4TUC|1|XA|G|993
4TUC|1|XA|A|994
4TUC|1|XA|C|995
4TUC|1|XA|A|996
4TUC|1|XA|U|997
*
4TUC|1|XA|A|1044
4TUC|1|XA|C|1045
4TUC|1|XA|A|1046
4TUC|1|XA|G|1047
*
4TUC|1|XA|C|1210
4TUC|1|XA|U|1211
4TUC|1|XA|U|1212
4TUC|1|XA|A|1213
4TUC|1|XA|C|1214
4TUC|1|XA|G|1215

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XN

30S ribosomal protein S14 type Z