J3_4UJE_058
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- AGAAG*CC*GAAAAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4UJE_058 not in the Motif Atlas
- Homologous match to J3_8CRE_018
- Geometric discrepancy: 0.2198
- The information below is about J3_8CRE_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_12393.2
- Basepair signature
- cWW-tSH-tHH-F-F-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
4UJE|1|A2|A|2575
4UJE|1|A2|G|2576
4UJE|1|A2|A|2577
4UJE|1|A2|A|2578
4UJE|1|A2|G|2579
*
4UJE|1|A2|C|2714
4UJE|1|A2|C|2715
*
4UJE|1|A2|G|2719
4UJE|1|A2|A|2720
4UJE|1|A2|A|2721
4UJE|1|A2|A|2722
4UJE|1|A2|A|2723
4UJE|1|A2|U|2724
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain CA
- 60S RIBOSOMAL PROTEIN L8
- Chain Cg
- 60S RIBOSOMAL PROTEIN L34
- Chain Cp
- 60S RIBOSOMAL PROTEIN L37A
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