J3_4V19_005
3D structure
- PDB id
- 4V19 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the mammalian mitoribosome, part 1 of 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CACC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 4V19|1|A|A|1339, 4V19|1|A|C|1340
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V19_005 not in the Motif Atlas
- Homologous match to J3_7RQB_012
- Geometric discrepancy: 0.1098
- The information below is about J3_7RQB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.3
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
4V19|1|A|C|1338
4V19|1|A|A|1339
4V19|1|A|C|1340
4V19|1|A|C|1341
*
4V19|1|A|G|1366
4V19|1|A|U|1367
4V19|1|A|U|1368
*
4V19|1|A|A|1382
4V19|1|A|U|1383
4V19|1|A|U|1384
4V19|1|A|A|1385
4V19|1|A|A|1386
4V19|1|A|A|1387
4V19|1|A|G|1388
Current chains
- Chain A
- MITORIBOSOMAL 16S RRNA
Nearby chains
- Chain E
- MITORIBOSOMAL PROTEIN UL3M, MRPL3
- Chain O
- MITORIBOSOMAL PROTEIN UL14M, MRPL14
Coloring options: