J3_4V49_016
3D structure
- PDB id
- 4V49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 8.7 Å
Loop
- Sequence
- CCAG*CGAAC*GAUGAG
- Length
- 15 nucleotides
- Bulged bases
- 4V49|1|B0|A|777
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V49_016 not in the Motif Atlas
- Geometric match to J3_5TBW_005
- Geometric discrepancy: 0.2986
- The information below is about J3_5TBW_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_33851.1
- Basepair signature
- cWW-tSH-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
4V49|1|B0|C|710
4V49|1|B0|C|711
4V49|1|B0|A|712
4V49|1|B0|G|713
*
4V49|1|B0|C|745
4V49|1|B0|G|746
4V49|1|B0|A|747
4V49|1|B0|A|748
4V49|1|B0|C|749
*
4V49|1|B0|G|773
4V49|1|B0|A|774
4V49|1|B0|U|775
4V49|1|B0|G|776
4V49|1|B0|A|777
4V49|1|B0|G|778
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BA
- 50S ribosomal protein L2
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