J3_4V49_018

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CGUAAG*CGA*UAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V49_018 not in the Motif Atlas

Homologous match to J3_7A0S_006

Geometric discrepancy: 0.2943

The information below is about J3_7A0S_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

4V49|1|B0|C|1311
4V49|1|B0|G|1312
4V49|1|B0|U|1313
4V49|1|B0|A|1314
4V49|1|B0|A|1315
4V49|1|B0|G|1316
*
4V49|1|B0|C|1641
4V49|1|B0|G|1642
4V49|1|B0|A|1643
*
4V49|1|B0|U|1656
4V49|1|B0|A|1657
4V49|1|B0|A|1658
4V49|1|B0|G|1659

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains