J3_4V49_020

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

UCGGGAC*GACAG*CA

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V49_020 not in the Motif Atlas

Homologous match to J3_7RQB_009

Geometric discrepancy: 0.3386

The information below is about J3_7RQB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_04858.2

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

4V49|1|B0|U|1357
4V49|1|B0|C|1358
4V49|1|B0|G|1359
4V49|1|B0|G|1360
4V49|1|B0|G|1361
4V49|1|B0|A|1362
4V49|1|B0|C|1363
*
4V49|1|B0|G|1394
4V49|1|B0|A|1395
4V49|1|B0|C|1396
4V49|1|B0|A|1397
4V49|1|B0|G|1398
*
4V49|1|B0|C|1415
4V49|1|B0|A|1416

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains