J3_4V49_022
3D structure
- PDB id
- 4V49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 8.7 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 4V49|1|B0|A|2497, 4V49|1|B0|U|2498
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V49_022 not in the Motif Atlas
- Homologous match to J3_7RQB_012
- Geometric discrepancy: 0.2618
- The information below is about J3_7RQB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.3
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
4V49|1|B0|C|2496
4V49|1|B0|A|2497
4V49|1|B0|U|2498
4V49|1|B0|C|2499
*
4V49|1|B0|G|2524
4V49|1|B0|U|2525
4V49|1|B0|U|2526
*
4V49|1|B0|A|2540
4V49|1|B0|U|2541
4V49|1|B0|U|2542
4V49|1|B0|A|2543
4V49|1|B0|A|2544
4V49|1|B0|A|2545
4V49|1|B0|G|2546
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BI
- 50S ribosomal protein L14
Coloring options: