J3_4V49_030
3D structure
- PDB id
- 4V49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 8.7 Å
Loop
- Sequence
- GC*GUGAAAAGAAC*GAGUGAAAGAGAACC
- Length
- 28 nucleotides
- Bulged bases
- 4V49|1|B0|G|514, 4V49|1|B0|A|518
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V49_030 not in the Motif Atlas
- Homologous match to J3_7A0S_015
- Geometric discrepancy: 0.3713
- The information below is about J3_7A0S_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_92134.2
- Basepair signature
- cWW-cWW-cWW-F-tWH-cSS-tSS-tSH-tSH-tWW-tHH-tWH-tWW-F-F-cSS-cSW-F-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V49|1|B0|G|30
4V49|1|B0|C|31
*
4V49|1|B0|G|485
4V49|1|B0|U|486
4V49|1|B0|G|487
4V49|1|B0|A|488
4V49|1|B0|A|489
4V49|1|B0|A|490
4V49|1|B0|A|491
4V49|1|B0|G|492
4V49|1|B0|A|493
4V49|1|B0|A|494
4V49|1|B0|C|495
*
4V49|1|B0|G|506
4V49|1|B0|A|507
4V49|1|B0|G|508
4V49|1|B0|U|509
4V49|1|B0|G|510
4V49|1|B0|A|511
4V49|1|B0|A|512
4V49|1|B0|A|513
4V49|1|B0|G|514
4V49|1|B0|A|515
4V49|1|B0|G|516
4V49|1|B0|A|517
4V49|1|B0|A|518
4V49|1|B0|C|519
4V49|1|B0|C|520
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BO
- 50S ribosomal protein L20
- Chain BQ
- 50S ribosomal protein L22
- Chain BS
- 50S ribosomal protein L24
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