J3_4V5H_027
3D structure
- PDB id
- 4V5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 4V5H|1|BB|U|2833
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V5H_027 not in the Motif Atlas
- Homologous match to J3_5J7L_048
- Geometric discrepancy: 0.2673
- The information below is about J3_5J7L_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_64069.1
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
4V5H|1|BB|G|2812
4V5H|1|BB|A|2813
4V5H|1|BB|A|2814
4V5H|1|BB|C|2815
*
4V5H|1|BB|G|2831
4V5H|1|BB|U|2832
4V5H|1|BB|U|2833
4V5H|1|BB|G|2834
4V5H|1|BB|A|2835
4V5H|1|BB|U|2836
*
4V5H|1|BB|A|2882
4V5H|1|BB|A|2883
4V5H|1|BB|U|2884
4V5H|1|BB|G|2885
4V5H|1|BB|A|2886
4V5H|1|BB|A|2887
4V5H|1|BB|C|2888
Current chains
- Chain BB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain B3
- 50S RIBOSOMAL PROTEIN L32
- Chain BD
- 50S RIBOSOMAL PROTEIN L3
- Chain BN
- 50S RIBOSOMAL PROTEIN L17
- Chain BS
- 50S RIBOSOMAL PROTEIN L22
Coloring options: