J3_4V5O_028
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- CUC*GUAUG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 4V5O|1|AA|U|1054, 4V5O|1|AA|A|1065
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5O|1|AA|C|1015
4V5O|1|AA|U|1016
4V5O|1|AA|C|1017
*
4V5O|1|AA|G|1051
4V5O|1|AA|U|1052
4V5O|1|AA|A|1053
4V5O|1|AA|U|1054
4V5O|1|AA|G|1055
*
4V5O|1|AA|C|1062
4V5O|1|AA|A|1063
4V5O|1|AA|A|1064
4V5O|1|AA|A|1065
4V5O|1|AA|G|1066
Current chains
- Chain AA
- 18S RRNA
Nearby chains
- Chain A5
- RIBOSOMAL PROTEIN S26E CONTAINING PROTEIN
- Chain A6
- RPS27E
- Chain AB
- RPS0E
- Chain AE
- RIBOSOMAL PROTEIN S5 CONTAINING PROTEIN
- Chain AH
- RIBOSOMAL PROTEIN S8 CONTAINING PROTEIN
- Chain AZ
- RPS21E
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