J3_4V69_016
3D structure
- PDB id
- 4V69 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex-bound E.coli 70S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.7 Å
Loop
- Sequence
- UGAUCUA*UGG*CAAA
- Length
- 14 nucleotides
- Bulged bases
- 4V69|1|BB|U|686, 4V69|1|BB|A|792, 4V69|1|BB|A|793
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V69_016 not in the Motif Atlas
- Homologous match to J3_4WF9_002
- Geometric discrepancy: 0.1265
- The information below is about J3_4WF9_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.1
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
4V69|1|BB|U|683
4V69|1|BB|G|684
4V69|1|BB|A|685
4V69|1|BB|U|686
4V69|1|BB|C|687
4V69|1|BB|U|688
4V69|1|BB|A|689
*
4V69|1|BB|U|773
4V69|1|BB|G|774
4V69|1|BB|G|775
*
4V69|1|BB|C|791
4V69|1|BB|A|792
4V69|1|BB|A|793
4V69|1|BB|A|794
Current chains
- Chain BB
- 23S ribosomal RNA
Nearby chains
- Chain B2
- 50S ribosomal protein L34
- Chain BC
- 50S ribosomal protein L2
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