J3_4V6X_034
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CGGCCGAU
- Length
- 26 nucleotides
- Bulged bases
- 4V6X|1|A5|A|2472, 4V6X|1|A5|G|2475
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6X|1|A5|A|2451
4V6X|1|A5|G|2452
4V6X|1|A5|A|2453
4V6X|1|A5|U|2454
4V6X|1|A5|G|2455
4V6X|1|A5|G|2456
*
4V6X|1|A5|C|2465
4V6X|1|A5|G|2466
4V6X|1|A5|U|2467
4V6X|1|A5|U|2468
4V6X|1|A5|C|2469
4V6X|1|A5|C|2470
4V6X|1|A5|G|2471
4V6X|1|A5|A|2472
4V6X|1|A5|A|2473
4V6X|1|A5|G|2474
4V6X|1|A5|G|2475
4V6X|1|A5|G|2476
*
4V6X|1|A5|C|2501
4V6X|1|A5|G|2502
4V6X|1|A5|G|2503
4V6X|1|A5|C|2504
4V6X|1|A5|C|2505
4V6X|1|A5|G|2506
4V6X|1|A5|A|2507
4V6X|1|A5|U|2508
Current chains
- Chain A5
- 28S ribosomal RNA
Nearby chains
- Chain A8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain CA
- 60S ribosomal protein L8
- Chain CG
- 60S ribosomal protein L7a
- Chain CN
- 60S ribosomal protein L15
- Chain CX
- 60S ribosomal protein L23a
- Chain Cj
- 60S ribosomal protein L37
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