J3_4V6Z_007

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

4V6Z|1|AA|U|1212, 4V6Z|1|AA|C|1214

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V6Z_007 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.2433

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

4V6Z|1|AA|C|990
4V6Z|1|AA|U|991
4V6Z|1|AA|U|992
4V6Z|1|AA|G|993
*
4V6Z|1|AA|C|1045
4V6Z|1|AA|A|1046
4V6Z|1|AA|G|1047
*
4V6Z|1|AA|C|1210
4V6Z|1|AA|U|1211
4V6Z|1|AA|U|1212
4V6Z|1|AA|A|1213
4V6Z|1|AA|C|1214
4V6Z|1|AA|G|1215

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AN

30S ribosomal protein S14