3D structure

PDB id
4V74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
GAAC*GUUGAU*AAUGAAC
Length
17 nucleotides
Bulged bases
4V74|1|BA|U|2833, 4V74|1|BA|A|2835
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V74_024 not in the Motif Atlas
Homologous match to J3_5J7L_048
Geometric discrepancy: 0.2314
The information below is about J3_5J7L_048
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_64069.1
Basepair signature
cWW-tHS-F-F-F-cWW-cWW-F-F
Number of instances in this motif group
1

Unit IDs

4V74|1|BA|G|2812
4V74|1|BA|A|2813
4V74|1|BA|A|2814
4V74|1|BA|C|2815
*
4V74|1|BA|G|2831
4V74|1|BA|U|2832
4V74|1|BA|U|2833
4V74|1|BA|G|2834
4V74|1|BA|A|2835
4V74|1|BA|U|2836
*
4V74|1|BA|A|2882
4V74|1|BA|A|2883
4V74|1|BA|U|2884
4V74|1|BA|G|2885
4V74|1|BA|A|2886
4V74|1|BA|A|2887
4V74|1|BA|C|2888

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B0
50S ribosomal protein L32
Chain BD
50S ribosomal protein L3
Chain BN
50S ribosomal protein L17
Chain BS
50S ribosomal protein L22

Coloring options:


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