3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
UA*UACCGGUGG*CGG
Length
14 nucleotides
Bulged bases
4V75|1|AA|A|718, 4V75|1|AA|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V75_003 not in the Motif Atlas
Homologous match to J3_6CZR_017
Geometric discrepancy: 0.5058
The information below is about J3_6CZR_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_11934.3
Basepair signature
cWW-F-cWW-F-F-tWW-F-cWW-F
Number of instances in this motif group
5

Unit IDs

4V75|1|AA|U|672
4V75|1|AA|A|673
*
4V75|1|AA|U|717
4V75|1|AA|A|718
4V75|1|AA|C|719
4V75|1|AA|C|720
4V75|1|AA|G|721
4V75|1|AA|G|722
4V75|1|AA|U|723
4V75|1|AA|G|724
4V75|1|AA|G|725
*
4V75|1|AA|C|732
4V75|1|AA|G|733
4V75|1|AA|G|734

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AF
30S ribosomal protein S6
Chain AK
30S ribosomal protein S11
Chain AR
30S ribosomal protein S18
Chain AU
30S ribosomal protein S21
Chain BC
50S ribosomal protein L2

Coloring options:


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