3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
GCCUAAC*GGGGAAUAU*AGC
Length
19 nucleotides
Bulged bases
4V75|1|AA|C|48, 4V75|1|AA|A|50, 4V75|1|AA|A|51
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V75_027 not in the Motif Atlas
Homologous match to J3_4LFB_014
Geometric discrepancy: 0.2445
The information below is about J3_4LFB_014
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_46317.4
Basepair signature
cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F
Number of instances in this motif group
4

Unit IDs

4V75|1|AA|G|46
4V75|1|AA|C|47
4V75|1|AA|C|48
4V75|1|AA|U|49
4V75|1|AA|A|50
4V75|1|AA|A|51
4V75|1|AA|C|52
*
4V75|1|AA|G|359
4V75|1|AA|G|360
4V75|1|AA|G|361
4V75|1|AA|G|362
4V75|1|AA|A|363
4V75|1|AA|A|364
4V75|1|AA|U|365
4V75|1|AA|A|366
4V75|1|AA|U|367
*
4V75|1|AA|A|393
4V75|1|AA|G|394
4V75|1|AA|C|395

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AL
30S ribosomal protein S12
Chain AP
30S ribosomal protein S16

Coloring options:


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