3D structure

PDB id
4V76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
GC*GCGAAAAG*CC
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V76_013 not in the Motif Atlas
Homologous match to J3_7RQB_001
Geometric discrepancy: 0.2723
The information below is about J3_7RQB_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_65070.3
Basepair signature
cWW-tWH-cWW-tSH-F-cWW-F
Number of instances in this motif group
4

Unit IDs

4V76|1|BA|G|30
4V76|1|BA|C|31
*
4V76|1|BA|G|474
4V76|1|BA|C|475
4V76|1|BA|G|476
4V76|1|BA|A|477
4V76|1|BA|A|478
4V76|1|BA|A|479
4V76|1|BA|A|480
4V76|1|BA|G|481
*
4V76|1|BA|C|509
4V76|1|BA|C|510

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BQ
50S ribosomal protein L20
Chain BS
50S ribosomal protein L22
Chain BU
50S ribosomal protein L24

Coloring options:


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