3D structure

PDB id
4V76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
AC*GAUAAGC*GAUUU
Length
14 nucleotides
Bulged bases
4V76|1|BA|A|74
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V76_014 not in the Motif Atlas
Homologous match to J3_7RQB_002
Geometric discrepancy: 0.1292
The information below is about J3_7RQB_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_84625.2
Basepair signature
cWW-F-cWW-F-F-F-cWW-F-cWW
Number of instances in this motif group
3

Unit IDs

4V76|1|BA|A|56
4V76|1|BA|C|57
*
4V76|1|BA|G|70
4V76|1|BA|A|71
4V76|1|BA|U|72
4V76|1|BA|A|73
4V76|1|BA|A|74
4V76|1|BA|G|75
4V76|1|BA|C|76
*
4V76|1|BA|G|110
4V76|1|BA|A|111
4V76|1|BA|U|112
4V76|1|BA|U|113
4V76|1|BA|U|114

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B2
50S ribosomal protein L34
Chain BT
50S ribosomal protein L23
Chain BY
50S ribosomal protein L29

Coloring options:


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