3D structure

PDB id
4V76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
UGAUCUA*UGG*CAAA
Length
14 nucleotides
Bulged bases
4V76|1|BA|U|686, 4V76|1|BA|A|792
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V76_015 not in the Motif Atlas
Homologous match to J3_7RQB_004
Geometric discrepancy: 0.3532
The information below is about J3_7RQB_004
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_39238.4
Basepair signature
cWW-tWH-cWW-tSW-F-F-cWW
Number of instances in this motif group
7

Unit IDs

4V76|1|BA|U|683
4V76|1|BA|G|684
4V76|1|BA|A|685
4V76|1|BA|U|686
4V76|1|BA|C|687
4V76|1|BA|U|688
4V76|1|BA|A|689
*
4V76|1|BA|U|773
4V76|1|BA|G|774
4V76|1|BA|G|775
*
4V76|1|BA|C|791
4V76|1|BA|A|792
4V76|1|BA|A|793
4V76|1|BA|A|794

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B2
50S ribosomal protein L34
Chain BC
50S ribosomal protein L2
Chain BE
50S ribosomal protein L4

Coloring options:


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