J3_4V77_003

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UA*UACCGGUGG*CGG

Length

14 nucleotides

Bulged bases

4V77|1|AA|U|723

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V77_003 not in the Motif Atlas

Homologous match to J3_5J7L_003

Geometric discrepancy: 0.307

The information below is about J3_5J7L_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_11934.4

Basepair signature

cWW-cWW-tWW-cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4V77|1|AA|U|672
4V77|1|AA|A|673
*
4V77|1|AA|U|717
4V77|1|AA|A|718
4V77|1|AA|C|719
4V77|1|AA|C|720
4V77|1|AA|G|721
4V77|1|AA|G|722
4V77|1|AA|U|723
4V77|1|AA|G|724
4V77|1|AA|G|725
*
4V77|1|AA|C|732
4V77|1|AA|G|733
4V77|1|AA|G|734

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AF

30S ribosomal protein S6

Chain AK

30S ribosomal protein S11

Chain AR

30S ribosomal protein S18