3D structure

PDB id
4V77 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
CUUG*CAG*CUUACG
Length
13 nucleotides
Bulged bases
4V77|1|AA|C|1214
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V77_007 not in the Motif Atlas
Homologous match to J3_4LFB_005
Geometric discrepancy: 0.2424
The information below is about J3_4LFB_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_82572.1
Basepair signature
cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
Number of instances in this motif group
2

Unit IDs

4V77|1|AA|C|990
4V77|1|AA|U|991
4V77|1|AA|U|992
4V77|1|AA|G|993
*
4V77|1|AA|C|1045
4V77|1|AA|A|1046
4V77|1|AA|G|1047
*
4V77|1|AA|C|1210
4V77|1|AA|U|1211
4V77|1|AA|U|1212
4V77|1|AA|A|1213
4V77|1|AA|C|1214
4V77|1|AA|G|1215

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AN
30S ribosomal protein S14

Coloring options:


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