J3_4V77_029

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

4V77|1|AA|A|994, 4V77|1|AA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V77_029 not in the Motif Atlas

Homologous match to J3_6CZR_063

Geometric discrepancy: 0.2718

The information below is about J3_6CZR_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.1

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

3

Unit IDs

4V77|1|AA|C|990
4V77|1|AA|U|991
4V77|1|AA|U|992
4V77|1|AA|G|993
4V77|1|AA|A|994
4V77|1|AA|C|995
4V77|1|AA|A|996
4V77|1|AA|U|997
*
4V77|1|AA|A|1044
4V77|1|AA|C|1045
4V77|1|AA|A|1046
4V77|1|AA|G|1047
*
4V77|1|AA|C|1210
4V77|1|AA|U|1211
4V77|1|AA|U|1212
4V77|1|AA|A|1213
4V77|1|AA|C|1214
4V77|1|AA|G|1215

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AC

30S ribosomal protein S3

Chain AN

30S ribosomal protein S14