J3_4V78_011
3D structure
- PDB id
- 4V78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 20 Å
Loop
- Sequence
- UG*UGUUG*CGCAA
- Length
- 12 nucleotides
- Bulged bases
- 4V78|1|AA|U|1086
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V78_011 not in the Motif Atlas
- Homologous match to J3_5J7L_009
- Geometric discrepancy: 0.3778
- The information below is about J3_5J7L_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76043.3
- Basepair signature
- cWW-cWW-tSS-F-F-F-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V78|1|AA|U|1073
4V78|1|AA|G|1074
*
4V78|1|AA|U|1083
4V78|1|AA|G|1084
4V78|1|AA|U|1085
4V78|1|AA|U|1086
4V78|1|AA|G|1087
*
4V78|1|AA|C|1098
4V78|1|AA|G|1099
4V78|1|AA|C|1100
4V78|1|AA|A|1101
4V78|1|AA|A|1102
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AB
- 30S ribosomal protein S2
- Chain AE
- 30S ribosomal protein S5
- Chain AU
- 30S ribosomal protein S21
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