J3_4V78_021

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

UCGACCC*GGAAA*UA

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V78_021 not in the Motif Atlas

Homologous match to J3_7RQB_009

Geometric discrepancy: 0.5744

The information below is about J3_7RQB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_04858.2

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

4V78|1|BA|U|1344
4V78|1|BA|C|1345
4V78|1|BA|G|1346
4V78|1|BA|A|1347
4V78|1|BA|C|1348
4V78|1|BA|C|1349
4V78|1|BA|C|1350
*
4V78|1|BA|G|1381
4V78|1|BA|G|1382
4V78|1|BA|A|1383
4V78|1|BA|A|1384
4V78|1|BA|A|1385
*
4V78|1|BA|U|1402
4V78|1|BA|A|1403

Current chains

Chain BA

23S ribosomal RNA

Nearby chains