3D structure

PDB id
4V7A (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
UAU*AGACUGC*GAGGAAGGUG
Length
20 nucleotides
Bulged bases
4V7A|1|AA|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V7A_027 not in the Motif Atlas
Homologous match to J3_4LFB_018
Geometric discrepancy: 0.1914
The information below is about J3_4LFB_018
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_17791.2
Basepair signature
cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
Number of instances in this motif group
2

Unit IDs

4V7A|1|AA|U|1116
4V7A|1|AA|A|1117
4V7A|1|AA|U|1118
*
4V7A|1|AA|A|1155
4V7A|1|AA|G|1156
4V7A|1|AA|A|1157
4V7A|1|AA|C|1158
4V7A|1|AA|U|1159
4V7A|1|AA|G|1160
4V7A|1|AA|C|1161
*
4V7A|1|AA|G|1175
4V7A|1|AA|A|1176
4V7A|1|AA|G|1177
4V7A|1|AA|G|1178
4V7A|1|AA|A|1179
4V7A|1|AA|A|1180
4V7A|1|AA|G|1181
4V7A|1|AA|G|1182
4V7A|1|AA|U|1183
4V7A|1|AA|G|1184

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AB
30S ribosomal protein S2
Chain AG
30S ribosomal protein S7
Chain AI
30S ribosomal protein S9
Chain AJ
30S ribosomal protein S10
Chain AN
30S ribosomal protein S14

Coloring options:


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