J3_4V7C_032

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

UCGACCC*GGAAA*UA

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V7C_032 not in the Motif Atlas

Homologous match to J3_7A0S_018

Geometric discrepancy: 0.5222

The information below is about J3_7A0S_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_94309.1

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW-F

Number of instances in this motif group

9

Unit IDs

4V7C|1|BA|U|1344
4V7C|1|BA|C|1345
4V7C|1|BA|G|1346
4V7C|1|BA|A|1347
4V7C|1|BA|C|1348
4V7C|1|BA|C|1349
4V7C|1|BA|C|1350
*
4V7C|1|BA|G|1381
4V7C|1|BA|G|1382
4V7C|1|BA|A|1383
4V7C|1|BA|A|1384
4V7C|1|BA|A|1385
*
4V7C|1|BA|U|1402
4V7C|1|BA|A|1403

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BV

50S ribosomal protein L23