J3_4V7R_020
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CUC*GAA*UAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 4V7R|1|B1|A|2703
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V7R_020 not in the Motif Atlas
- Homologous match to J3_8C3A_010
- Geometric discrepancy: 0.216
- The information below is about J3_8C3A_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V7R|1|B1|C|2664
4V7R|1|B1|U|2665
4V7R|1|B1|C|2666
*
4V7R|1|B1|G|2690
4V7R|1|B1|A|2691
4V7R|1|B1|A|2692
*
4V7R|1|B1|U|2701
4V7R|1|B1|A|2702
4V7R|1|B1|A|2703
4V7R|1|B1|A|2704
4V7R|1|B1|A|2705
4V7R|1|B1|G|2706
Current chains
- Chain B1
- 25S ribosomal RNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain BE
- 60S ribosomal protein L5
- Chain BK
- 60S ribosomal protein L11-A
- Chain BT
- 60S ribosomal protein L21-A
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