J3_4V91_001
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAAAUUUGAAA*UAAUUUGGAG*CGAAG
- Length
- 26 nucleotides
- Bulged bases
- 4V91|1|1|G|156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V91_001 not in the Motif Atlas
- Homologous match to J3_8C3A_001
- Geometric discrepancy: 0.0911
- The information below is about J3_8C3A_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88489.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-tWH-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
4V91|1|1|C|113
4V91|1|1|A|114
4V91|1|1|A|115
4V91|1|1|A|116
4V91|1|1|U|117
4V91|1|1|U|118
4V91|1|1|U|119
4V91|1|1|G|120
4V91|1|1|A|121
4V91|1|1|A|122
4V91|1|1|A|123
*
4V91|1|1|U|149
4V91|1|1|A|150
4V91|1|1|A|151
4V91|1|1|U|152
4V91|1|1|U|153
4V91|1|1|U|154
4V91|1|1|G|155
4V91|1|1|G|156
4V91|1|1|A|157
4V91|1|1|G|158
*
4V91|1|1|C|263
4V91|1|1|G|264
4V91|1|1|A|265
4V91|1|1|A|266
4V91|1|1|G|267
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain G
- EL8
- Chain L
- EL13
- Chain N
- EL15
- Chain h
- UL29
- Chain i
- EL36
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