J3_4V91_007
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUUG*CUUAUU*AAGACAUU
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V91_007 not in the Motif Atlas
- Homologous match to J3_8C3A_008
- Geometric discrepancy: 0.1046
- The information below is about J3_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_18654.1
- Basepair signature
- cWW-F-F-tSH-tHW-F-F-F-cWW-F-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
4V91|1|1|A|2432
4V91|1|1|U|2433
4V91|1|1|U|2434
4V91|1|1|G|2435
*
4V91|1|1|C|2512
4V91|1|1|U|2513
4V91|1|1|U|2514
4V91|1|1|A|2515
4V91|1|1|U|2516
4V91|1|1|U|2517
*
4V91|1|1|A|2590
4V91|1|1|A|2591
4V91|1|1|G|2592
4V91|1|1|A|2593
4V91|1|1|C|2594
4V91|1|1|A|2595
4V91|1|1|U|2596
4V91|1|1|U|2597
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain A
- UL2
- Chain G
- EL8
- Chain N
- EL15
- Chain i
- EL36
Coloring options: