J3_4V91_016
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UC*GAGGACUGCG*CAAGGA
- Length
- 18 nucleotides
- Bulged bases
- 4V91|1|1|A|607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V91_016 not in the Motif Atlas
- Homologous match to J3_8P9A_048
- Geometric discrepancy: 0.1028
- The information below is about J3_8P9A_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83726.1
- Basepair signature
- cWW-cWW-F-F-F-cWS-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4V91|1|1|U|502
4V91|1|1|C|503
*
4V91|1|1|G|588
4V91|1|1|A|589
4V91|1|1|G|590
4V91|1|1|G|591
4V91|1|1|A|592
4V91|1|1|C|593
4V91|1|1|U|594
4V91|1|1|G|595
4V91|1|1|C|596
4V91|1|1|G|597
*
4V91|1|1|C|606
4V91|1|1|A|607
4V91|1|1|A|608
4V91|1|1|G|609
4V91|1|1|G|610
4V91|1|1|A|611
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain C
- UL4
- Chain E
- EL6
- Chain F
- UL30
- Chain e
- EL32
Coloring options: