J3_4V91_019
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UCGAUC*GGAAU*AA
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V91_019 not in the Motif Atlas
- Homologous match to J3_8C3A_052
- Geometric discrepancy: 0.0864
- The information below is about J3_8C3A_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_70383.1
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
4V91|1|1|U|1526
4V91|1|1|C|1527
4V91|1|1|G|1528
4V91|1|1|A|1529
4V91|1|1|U|1530
4V91|1|1|C|1531
*
4V91|1|1|G|1591
4V91|1|1|G|1592
4V91|1|1|A|1593
4V91|1|1|A|1594
4V91|1|1|U|1595
*
4V91|1|1|A|1612
4V91|1|1|A|1613
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain X
- UL23
- Chain g
- EL34
- Chain k
- EL38
- Chain l
- EL39
Coloring options: