J3_4V91_026
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AC*GAUACGU*AAUCU
- Length
- 14 nucleotides
- Bulged bases
- 4V91|1|4|U|60, 4V91|1|4|C|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V91_026 not in the Motif Atlas
- Homologous match to J3_8P9A_067
- Geometric discrepancy: 0.1164
- The information below is about J3_8P9A_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V91|1|4|A|44
4V91|1|4|C|45
*
4V91|1|4|G|58
4V91|1|4|A|59
4V91|1|4|U|60
4V91|1|4|A|61
4V91|1|4|C|62
4V91|1|4|G|63
4V91|1|4|U|64
*
4V91|1|4|A|96
4V91|1|4|A|97
4V91|1|4|U|98
4V91|1|4|C|99
4V91|1|4|U|100
Current chains
- Chain 4
- 5.8S RRNA
Nearby chains
- Chain X
- UL23
- Chain h
- UL29
- Chain j
- EL37
- Chain l
- EL39
Coloring options: