J3_4V92_002
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGAG*CAG*UCGAAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V92_002 not in the Motif Atlas
- Homologous match to J3_4V88_032
- Geometric discrepancy: 0.153
- The information below is about J3_4V88_032
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_54972.1
- Basepair signature
- cWW-tWW-F-cWW-F-tHS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V92|1|A2|A|760
4V92|1|A2|G|761
4V92|1|A2|A|762
4V92|1|A2|G|763
*
4V92|1|A2|C|773
4V92|1|A2|A|774
4V92|1|A2|G|775
*
4V92|1|A2|U|785
4V92|1|A2|C|786
4V92|1|A2|G|787
4V92|1|A2|A|788
4V92|1|A2|A|789
4V92|1|A2|U|790
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain BE
- ES4
- Chain BJ
- US4
- Chain BY
- ES24
Coloring options: