J3_4V95_035

3D structure

PDB id

4V95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of YAEJ bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

4V95|1|AA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V95_035 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1565

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

4V95|1|AA|C|990
4V95|1|AA|U|991
4V95|1|AA|U|992
4V95|1|AA|G|993
4V95|1|AA|A|994
4V95|1|AA|C|995
4V95|1|AA|A|996
4V95|1|AA|U|997
*
4V95|1|AA|A|1044
4V95|1|AA|C|1045
4V95|1|AA|A|1046
4V95|1|AA|G|1047
*
4V95|1|AA|C|1210
4V95|1|AA|U|1211
4V95|1|AA|U|1212
4V95|1|AA|A|1213
4V95|1|AA|C|1214
4V95|1|AA|G|1215

Current chains

Chain AA

16S Ribosomal RNA

Nearby chains

Chain AN

30S Ribosomal Protein S14