J3_4V9P_102
3D structure
- PDB id
- 4V9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GCCUAAC*GGGGAAUAU*AGC
- Length
- 19 nucleotides
- Bulged bases
- 4V9P|1|DA|C|48, 4V9P|1|DA|A|50, 4V9P|1|DA|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V9P_102 not in the Motif Atlas
- Homologous match to J3_5J7L_050
- Geometric discrepancy: 0.0894
- The information below is about J3_5J7L_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46317.4
- Basepair signature
- cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4V9P|1|DA|G|46
4V9P|1|DA|C|47
4V9P|1|DA|C|48
4V9P|1|DA|U|49
4V9P|1|DA|A|50
4V9P|1|DA|A|51
4V9P|1|DA|C|52
*
4V9P|1|DA|G|359
4V9P|1|DA|G|360
4V9P|1|DA|G|361
4V9P|1|DA|G|362
4V9P|1|DA|A|363
4V9P|1|DA|A|364
4V9P|1|DA|U|365
4V9P|1|DA|A|366
4V9P|1|DA|U|367
*
4V9P|1|DA|A|393
4V9P|1|DA|G|394
4V9P|1|DA|C|395
Current chains
- Chain DA
- 16S rRNA
Nearby chains
- Chain CK
- 50S ribosomal protein L14
- Chain DL
- 30S ribosomal protein S12
- Chain DP
- 30S ribosomal protein S16
- Chain DV
- elongation factor G
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