J3_4W29_012
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CGUAAG*CGG*UCAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4W29_012 not in the Motif Atlas
- Homologous match to J3_7RQB_007
- Geometric discrepancy: 0.2187
- The information below is about J3_7RQB_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32852.3
- Basepair signature
- cWW-tSH-tHW-F-F-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
4W29|1|BA|C|1298
4W29|1|BA|G|1299
4W29|1|BA|U|1300
4W29|1|BA|A|1301
4W29|1|BA|A|1302
4W29|1|BA|G|1303
*
4W29|1|BA|C|1625
4W29|1|BA|G|1626
4W29|1|BA|G|1627
*
4W29|1|BA|U|1639
4W29|1|BA|C|1640
4W29|1|BA|A|1641
4W29|1|BA|G|1642
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: