J3_4W2E_011
3D structure
- PDB id
- 4W2E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUAG*CGAAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 4W2E|1|a|U|871
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4W2E_011 not in the Motif Atlas
- Homologous match to J3_4LFB_001
- Geometric discrepancy: 0.0701
- The information below is about J3_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_02285.1
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
4W2E|1|a|C|826
4W2E|1|a|U|827
4W2E|1|a|A|828
4W2E|1|a|G|829
*
4W2E|1|a|C|857
4W2E|1|a|G|858
4W2E|1|a|A|859
4W2E|1|a|A|860
4W2E|1|a|G|861
*
4W2E|1|a|C|868
4W2E|1|a|G|869
4W2E|1|a|U|870
4W2E|1|a|U|871
4W2E|1|a|A|872
4W2E|1|a|A|873
4W2E|1|a|G|874
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain h
- 30S ribosomal protein S8
Coloring options: