J3_4W4G_001
3D structure
- PDB id
- 4W4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUAG*CGAAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 4W4G|1|QA|U|871, 4W4G|1|QA|A|873
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4W4G_001 not in the Motif Atlas
- Homologous match to J3_4LFB_001
- Geometric discrepancy: 0.0979
- The information below is about J3_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
4W4G|1|QA|C|826
4W4G|1|QA|U|827
4W4G|1|QA|A|828
4W4G|1|QA|G|829
*
4W4G|1|QA|C|857
4W4G|1|QA|G|858
4W4G|1|QA|A|859
4W4G|1|QA|A|860
4W4G|1|QA|G|861
*
4W4G|1|QA|C|868
4W4G|1|QA|G|869
4W4G|1|QA|U|870
4W4G|1|QA|U|871
4W4G|1|QA|A|872
4W4G|1|QA|A|873
4W4G|1|QA|G|874
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QB
- 30S ribosomal protein S2
- Chain QH
- 30S ribosomal protein S8
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