J3_4WT8_004

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4WT8_004 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.1155

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

4WT8|1|Ab|C|968
4WT8|1|Ab|U|969
4WT8|1|Ab|U|970
4WT8|1|Ab|G|971
*
4WT8|1|Ab|C|1028
4WT8|1|Ab|A|1029
4WT8|1|Ab|G|1030
*
4WT8|1|Ab|C|1192
4WT8|1|Ab|U|1193
4WT8|1|Ab|U|1194
4WT8|1|Ab|A|1195
4WT8|1|Ab|C|1196
4WT8|1|Ab|G|1197

Current chains

Chain Ab

RNA (1504-MER)

Nearby chains

Chain AN

30S ribosomal protein S14 type Z