J3_4WT8_024

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGUAAG*CGG*UCAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4WT8_024 not in the Motif Atlas

Homologous match to J3_7RQB_007

Geometric discrepancy: 0.075

The information below is about J3_7RQB_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.3

Basepair signature

cWW-tSH-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

4WT8|1|D1|C|1343
4WT8|1|D1|G|1344
4WT8|1|D1|U|1345
4WT8|1|D1|A|1346
4WT8|1|D1|A|1347
4WT8|1|D1|G|1348
*
4WT8|1|D1|C|1670
4WT8|1|D1|G|1671
4WT8|1|D1|G|1672
*
4WT8|1|D1|U|1685
4WT8|1|D1|C|1686
4WT8|1|D1|A|1687
4WT8|1|D1|G|1688

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains