J3_4WT8_026
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UUG*CUAAC*GGACAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WT8_026 not in the Motif Atlas
- Homologous match to J3_7RQB_010
- Geometric discrepancy: 0.1058
- The information below is about J3_7RQB_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89368.3
- Basepair signature
- cWW-tSH-tHW-F-cWW-tHH-cWW
- Number of instances in this motif group
- 3
Unit IDs
4WT8|1|D1|U|2112
4WT8|1|D1|U|2113
4WT8|1|D1|G|2114
*
4WT8|1|D1|C|2217
4WT8|1|D1|U|2218
4WT8|1|D1|A|2219
4WT8|1|D1|A|2220
4WT8|1|D1|C|2221
*
4WT8|1|D1|G|2234
4WT8|1|D1|G|2235
4WT8|1|D1|A|2236
4WT8|1|D1|C|2237
4WT8|1|D1|A|2238
4WT8|1|D1|G|2239
Current chains
- Chain D1
- 23S rRNA (2899-MER)
Nearby chains
- Chain AD
- 30S ribosomal protein S4
- Chain DB
- 50S ribosomal protein L2
- Chain DH
- 50S ribosomal protein L28
- Chain DI
- 50S ribosomal protein L9
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